Allstats: Automatically processes T-test, U-test, Anova, Scheffe(Anova...

In CHKim5/LMSstat: AUTOMATION OF STATISTICAL TESTS WITH AN IDENTICAL DATA INPUT.

Description

Automatically processes T-test, U-test, Anova, Scheffe(Anova Post-Hoc), Krukal Wallis, Dunn-test(BH adjusted,(Kurkal Wallis Post-Hoc)) while allowing adjustment of FDR

Usage

Allstats(Data, Adjust_p_value = T, Adjust_method = "BH")

Arguments

Data	csv file with Header as False First column with Sample Second column with Multilevel(Mixomics) so that it can be compatible with other multivariate statistics Third column with Group information. Rest of the columns are the metabolites to be tested.
Adjust_p_value	Set True if FDR adjustments are to be made. If not set False
Adjust_method	adjustment methods frequently used. "holm", "hochberg", "hommel", "bonferroni", "BH", "BY","fdr", "none"

Value

List including Result Matrix of p-values, converted datas.

Examples

data(Data)
Result<-Allstats(Data)
Result<-Allstats_new(Data) # faster version contributed by Daehwan Kim

CHKim5/LMSstat documentation built on Dec. 17, 2021, 12:55 p.m.