AS_barplot: Automatically save barplots for all metabolites including...

In CHKim5/LMSstat: AUTOMATION OF STATISTICAL TESTS WITH AN IDENTICAL DATA INPUT.

Description

Automatically save barplots for all metabolites including asterisks for significance.

Usage

AS_barplot(
  data,
  asterisk = "t_test",
  significant_variable_only = F,
  color = c("#FF3300", "#FF6600", "#FFCC00", "#99CC00", "#0066CC", "#660099"),
  legend_position = "none",
  order = NULL,
  tip_length = 0.01,
  label_size = 2.88,
  step_increase = 0.05,
  width = 0.3,
  fig_width = NA,
  fig_height = NA,
  X_text = 10,
  Y_text = 12,
  Y_lab = 10,
  T_size = 15,
  sig_int = c(0.05, 0.01)
)

Arguments

data	List inheriting from Allstats
asterisk	Choose asterisk to plot ("Dunn","Scheffe","u_test","t_test")
significant_variable_only	show significant variable only (T,F)
color	colors used for ggplots.
legend_position	legend position "none","left","right","bottom","top"
order	order of the groups; order = c("A","B","C")
tip_length	significance tip length
label_size	significance label size
step_increase	significance step increase
width	bar width
fig_width	figure size
fig_height	figure size
X_text	X axis text size
Y_text	Y axis title size
Y_lab	y axis text size
T_size	Title size
sig_int	significance parameter

Value

ggbarplot

CHKim5/LMSstat documentation built on Dec. 17, 2021, 12:55 p.m.