AdjustCN: Corrects CN and filters cells based on AdjustPerCell output

In CL-CHEN-Lab/User_interface_for_Kronos_scRT: R-package and Shiny App interface for the analysis of single cell replication timing data

Corrects CN and filters cells based on AdjustPerCell output

Description

Corrects CN and filters cells based on AdjustPerCell output

Usage

AdjustCN(
  scCN,
  PerCell,
  Basename_leves = NULL,
  Group_leves = NULL,
  Chr_filter = NULL
)

Arguments

scCN,	scCN dataframe created by CallCNV
PerCell,	PerCell dataframe created by AdjustPerCell
Basename_leves,	Sample basenames order (optional)
Group_leves,	Group basenames order (optional)
Chr_filter,	filters chromosomes to keep in the analysis (optional)

Value

tibble

CL-CHEN-Lab/User_interface_for_Kronos_scRT documentation built on Aug. 1, 2022, 2:08 p.m.