Files in CharlesJB/rnaseq
Wrapper Functions for RNA-Seq Post-Processing

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/DE.R R/PCA.R R/counts.R R/data.R R/deliverables.R R/demo.R R/import.R
data-raw/download_and_clean_ensembl_hsapiens.sh
data-raw/download_and_clean_ensembl_mmusculus.sh
data-raw/download_and_clean_ensembl_rnorvegicus.sh
data-raw/download_and_clean_gencode_hsapiens.sh
data-raw/scripts/add_refseq.R data-raw/scripts/prepare_anno_ensembl.R data-raw/scripts/prepare_anno_ensembl_hsapiens.R data-raw/scripts/prepare_anno_gencode_hsapiens.R
data/Hs.Ensembl79.RData
data/Hs.Ensembl91.RData
data/Hs.Gencode27.RData
data/Mm.Ensembl91.RData
data/Mm.Ensembl92.RData
data/Rn.Ensembl92.RData
inst/extdata/quant/a/abundance.tsv
inst/extdata/quant/b/abundance.tsv
inst/extdata/quant/c/abundance.tsv
inst/extdata/quant/d/abundance.tsv
man/Hs.Ensembl79.Rd man/Hs.Ensembl91.Rd man/Hs.Gencode27.Rd man/Mm.Ensembl91.Rd man/Mm.Ensembl92.Rd man/Rn.Ensembl92.Rd man/deseq2_analysis.Rd man/format_counts.Rd man/format_de.Rd man/get_demo_abundance_files.Rd man/get_demo_design.Rd man/get_demo_kallisto_dir.Rd man/get_demo_txi.Rd man/import_kallisto.Rd man/produce_deliverables.Rd man/produce_pca.Rd
rnaseq.Rproj
CharlesJB/rnaseq documentation built on June 13, 2018, 4:58 a.m.