Files in DanWiebe/fsgor
Package for Fold-specific GO Terms Recognition
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/GAF_reader.R
R/OBO_reader.R
R/annot_data.R
R/annotation_data_to_wide.R
R/bg_genes.R
R/colnameslist.R
R/create_ancestry_annot.R
R/down_genes.R
R/fold_spec_graph.R
R/fold_spec_recognition.R
R/fs_data_viz_preparation.R
R/fs_rectangle_plot.R
R/fs_res_down.R
R/fs_res_up.R
R/func_annot_test.R
R/intersect_with_background.R
R/multiple_sets_annot.R
R/par_multiple_sets_annot.R
R/patterns_enum.R
R/percentiler.R
R/prepare_annotation.R
R/six_perc_labs.R
R/up_annot.R
R/up_genes.R
data/annot_data.rda
data/bg_genes.rda
data/colnameslist.rda
data/down_genes.rda
data/fs_res_down.rda
data/fs_res_up.rda
data/patterns_enum.rda
data/six_perc_labs.rda
data/up_annot.rda
data/up_genes.rda
desktop.ini
fsgor.Rproj
inst/extdata/gene_association.tair
inst/extdata/goslim_plant.obo
inst/extdata/rna_seq_example.txt
man/annot_data.Rd
man/bg_genes.Rd
man/colnameslist.Rd
man/convert_annotation_wide.Rd
man/create_annotation_with_ancestry.Rd
man/create_intervals_matrix.Rd
man/div_genes_to_quantiles.Rd
man/down_genes.Rd
man/find_boundaries.Rd
man/fold_spec_chart.Rd
man/fold_spec_chart_data.Rd
man/fold_spec_graph.Rd
man/fs_res_down.Rd
man/fs_res_up.Rd
man/func_annot_test_internal.Rd
man/get_term_ancestors.Rd
man/igraph_data_prep.Rd
man/intersect_with_background.Rd
man/multiple_sets_annot.Rd
man/par_multiple_sets_annot.Rd
man/patterns_enum.Rd
man/prepare_annotaion.Rd
man/read_gaf.Rd
man/read_obo.Rd
man/recognize_fs_terms.Rd
man/six_perc_labs.Rd
man/up_annot.Rd
man/up_genes.Rd
vignettes/FSGOR_user_guide.html
vignettes/fsgor.md
vignettes/output_20_1.png
vignettes/output_22_0.png
