div_genes_to_quantiles: Gene set quantile separator

In DanWiebe/fsgor: Package for Fold-specific GO Terms Recognition

Description

Converts the set of genes in to quantiles according log value of fold change and produces all possible combinations of resulting gene subsets. Input dataset must be dataframe with gene ID's in the first row and corresponding fold change values in the second row. Note: dataframe must contain only genes with common type of regulation (up or down)

Usage

div_genes_to_quantiles(data, n)

Arguments

data	dataframe contains initial set of genes gene ID's in the first row and corresponding fold change values in the second row
n	number of quantiles

Value

list of gene sets for each quatile and all combinations

Examples

    data(up_genes, package = "fsgor")
    gene_sets <- div_genes_to_quantiles(up_genes, 6)

DanWiebe/fsgor documentation built on May 12, 2019, 12:30 a.m.