read_obo: OBO file reader
In DanWiebe/fsgor: Package for Fold-specific GO Terms Recognition
Description
Usage
Arguments
Value
Examples
Description
Parses .obo format file (open biomedical ontologies), returns list contains GO term ontology relation data,
GO terms real names, GO terms namespaces
Usage
1
read_obo(obopath)
Arguments
obopath
path to the .obo format file
Value
lists that contain GO terms ancestry data, names for GO terms, and corresponding namespace for each GO term
Examples
1
2
go_path <- system.file("extdata", "goslim_plant.obo", package = "fsgor")
read_obo(go_path)
DanWiebe/fsgor documentation built on May 12, 2019, 12:30 a.m.
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Description Usage Arguments Value Examples
Description
Parses .obo format file (open biomedical ontologies), returns list contains GO term ontology relation data, GO terms real names, GO terms namespaces
Usage
1 | read_obo(obopath)
|
Arguments
obopath |
path to the .obo format file |
Value
lists that contain GO terms ancestry data, names for GO terms, and corresponding namespace for each GO term
Examples
1 2 | go_path <- system.file("extdata", "goslim_plant.obo", package = "fsgor")
read_obo(go_path)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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