Description Usage Arguments Value Examples
Annotaion for terms taking into account True Path Rule
1 | create_annotation_with_ancestry(rellist, annotlist)
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rellist |
list contains child terms as keys and nearest parents as values |
annotlist |
list contains terms as keys and direct annotations as values |
list contains terms as keys and genes annotated according to True Path Rule as values
1 2 3 4 5 6 7 | ## Not run:
onto_data <- fsgor::read_obo("~/go.obo")
annot_data <- fsgor::read_gaf("~/goa_human.gaf")
annot_data <- fsgor::convert_annotation_wide(annot_data$data)
create_annotation_with_ancestry(onto_data$relation_data, annot_data)
## End(Not run)
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