TPP: Thermal proteome profiling (TPP)
In DoroChilds/TPP: Analyze thermal proteome profiling (TPP) experiments
Description
Usage
Arguments
Details
Value
References
Description
TPP is a toolbox for analyzing thermal proteome profiling
(TPP) experiments.
Usage
1
.onLoad(libname, pkgname)
Arguments
libname
a character string giving the library directory where the
package defining the namespace was found. Passed to .onLoad function.
pkgname
a character string giving the name of the package. Passed to
.onLoad function.
Details
In order to start a TPP-TR analysis, use function
analyzeTPPTR. For a TPP-CCR analysis, use function
analyzeTPPCCR. See the vignette for detailed instructions.
Value
No return value defined for this document.
References
Savitski, M. M., Reinhard, F. B., Franken, H., Werner, T.,
Savitski, M. F., Eberhard, D., ... & Drewes, G. (2014). Tracking cancer
drugs in living cells by thermal profiling of the proteome. Science,
346(6205), 1255784.
Franken, H, Mathieson, T, Childs, D. Sweetman, G. Werner, T. Huber, W. & Savitski, M. M. (2015),
Thermal proteome profiling for unbiased identification of drug targets and detection of downstream effectors.
Nature protocols 10(10), 1567-1593.
DoroChilds/TPP documentation built on Oct. 31, 2021, 4:38 a.m.
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Description Usage Arguments Details Value References
Description
TPP is a toolbox for analyzing thermal proteome profiling (TPP) experiments.
Usage
1 | .onLoad(libname, pkgname)
|
Arguments
libname |
a character string giving the library directory where the package defining the namespace was found. Passed to .onLoad function. |
pkgname |
a character string giving the name of the package. Passed to .onLoad function. |
Details
In order to start a TPP-TR analysis, use function
analyzeTPPTR. For a TPP-CCR analysis, use function
analyzeTPPCCR. See the vignette for detailed instructions.
Value
No return value defined for this document.
References
Savitski, M. M., Reinhard, F. B., Franken, H., Werner, T., Savitski, M. F., Eberhard, D., ... & Drewes, G. (2014). Tracking cancer drugs in living cells by thermal profiling of the proteome. Science, 346(6205), 1255784.
Franken, H, Mathieson, T, Childs, D. Sweetman, G. Werner, T. Huber, W. & Savitski, M. M. (2015), Thermal proteome profiling for unbiased identification of drug targets and detection of downstream effectors. Nature protocols 10(10), 1567-1593.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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