Description Usage Arguments Value
View source: R/tpp2dPlotQChist.R
Plots quality control histograms of pEC50 values of reference dataset and indicates the pEC50 values of the 2D-TPP experiment
1 2 3 4 5 6 7 8 9 | tpp2dPlotQChist(
configFile = NULL,
resultTable = NULL,
resultPath = NULL,
trRef = NULL,
fcStr = "rel_fc_",
idVar = "gene_name",
qualColName = "qupm"
)
|
configFile |
data frame or system path to table that specifies important details of the 2D-TPP experiment |
resultTable |
data.frame containing the results of a CCR analysis of 2D-TPP data |
resultPath |
character string containing a valid system path to which the the qc plots will be written |
trRef |
character string with a link to a TPP-TR reference object RData file |
fcStr |
character string indicating how columns that will contain the actual fold change values are called. |
idVar |
character string indicating name of the columns containing the unique protein identifiers |
qualColName |
character string indicating which column contain protein identification quality measures |
A pdf with various quality control plots for a specified 2D-TPP data set
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