CDplot: CDplot

In ETHZ-INS/enrichMiR: enrichMiR: miRNA target enrichment analysis

CDplot

Description

Creates a cumulative distribution plot, eventually handling division of values into bins according to another variable.

Usage

CDplot(
  ll,
  by = NULL,
  k = 3,
  breaks = NULL,
  sameFreq = FALSE,
  addN = FALSE,
  dig.lab = NULL,
  minN = 10,
  pvals = FALSE,
  ...
)

Arguments

ll	A named list of numeric values, or a vector of values to be divided
by	If 'll' is a list, 'by' is ignored. If 'll' is a vector of values, 'by' should be a numeric/logical/factor vector of the same length according to which the values should be divided.
k	The number of divisions (ignored if 'll' is a list, or if 'by' is logical or a factor).
breaks	The breaks to use (ignored if 'll' is a list). If NULL, will be calculated.
sameFreq	Logical; whether to calculate breaks so thate the groups have the same frequency (rather than same width)
addN	Logical; whether to add group sizes to their names
dig.lab	Number of digits for automatically-generated breaks.
minN	The minimum number of items per group (groups below this will be merged if the breaks are numeric).
pvals	Logical; whether to print the p-values of KS tests between sets
...	Passed to 'geom_line' (can for instance be used for 'size', etc.)

Value

A ggplot.

ETHZ-INS/enrichMiR documentation built on July 20, 2024, 12:03 a.m.