gsea: gsea
In ETHZ-INS/enrichMiR: enrichMiR: miRNA target enrichment analysis
gsea R Documentation
gsea
Description
gsea
Usage
gsea(signal, sets, maxSize = 3000, nperm = 2000, ...)
Arguments
signal
A named numeric vector indicating the features' response (e.g.
logFC)
sets
A data.frame with at least the following columns:
'set', 'feature'.
maxSize
The maximum number of elements in a set to be tested (default
500). If the test takes too long to run, consider setting this.
nperm
The number of permutations, default 2000. The more permutations,
the more precise the p-values, in particular for small p-values.
Value
a data.frame.
ETHZ-INS/enrichMiR documentation built on July 20, 2024, 12:03 a.m.
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| gsea | R Documentation |
gsea
Description
gsea
Usage
gsea(signal, sets, maxSize = 3000, nperm = 2000, ...)
Arguments
signal |
A named numeric vector indicating the features' response (e.g. logFC) |
sets |
A data.frame with at least the following columns: 'set', 'feature'. |
maxSize |
The maximum number of elements in a set to be tested (default 500). If the test takes too long to run, consider setting this. |
nperm |
The number of permutations, default 2000. The more permutations, the more precise the p-values, in particular for small p-values. |
Value
a data.frame.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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