plMod: plMod

In ETHZ-INS/enrichMiR: enrichMiR: miRNA target enrichment analysis

plMod

Description

Fits linear models between a signal and set variables. This is a flexible but slow implementations, we recommend ebayes for a faster one.

Usage

plMod(signature, sets, var = "sites", correctForLength = NULL)

modsites(x, sets, correctForLength = TRUE, ...)

modscore(x, sets, ...)

Arguments

signature	A named numeric vector
sets	A data.frame with at least the following columns: 'set', 'feature', and the variable specified by 'var'.
var	The independent variable to use, either 'sites' or 'score'.
correctForLength	Logical; whether to correct for length (i.e. total sites). Defaults to TRUE if ‘var=’sites'', FALSE otherwise.

Value

a data.frame

ETHZ-INS/enrichMiR documentation built on July 20, 2024, 12:03 a.m.