heterozygosity: Heterozygosity

View source: R/heterozygosity.R

heterozygosityR Documentation

Heterozygosity

Description

Calculate observed and heterozygosity.

Usage

heterozygosity(g, by.strata = FALSE, type = c("expected", "observed"))

Arguments

g

a gtypes object.

by.strata

logical - return results by strata?

type

return expected or observed heterozygosity

Note

If g is a haploid object with sequences, the value for expected heterozygosity (= haplotpyic diversity) will be returned.

Author(s)

Eric Archer eric.archer@noaa.gov

Examples

data(msats.g)

# Expected heterozygosity
heterozygosity(msats.g, type = "expected")

# Observed heterozygosity by strata
heterozygosity(msats.g, FALSE, "observed")


EricArcher/strataG documentation built on May 17, 2024, 12:41 p.m.