export_details: Exports downloaded details into seperate .csv files for each...

In EvolEcolGroup/mtDNAcombine: R package to download, combine, and curate sequences from public databases

Description

export_details

Usage

export_details(data, file_path = getwd())

Arguments

data	data frame with $sci_nam column (expected to be GB_with_SeqDat, the data frame result of the pipeline so far).
file_path	path to newly created .csv file, defaults to working directory

Details

Function takes data frame with column $sci_nam and splits according to species name before exporting sample details as individual .csv files.

Main input data frame is split by species (according to $sci_nam column). For each species a separate .csv file is then written out containing all the information downloaded and stored about each accession.

EvolEcolGroup/mtDNAcombine documentation built on July 8, 2021, 10:30 p.m.