get_sample_details: Gets details of individual samples
In EvolEcolGroup/mtDNAcombine: R package to download, combine, and curate sequences from public databases
Description
Usage
Arguments
Details
View source: R/get_sample_details.R
Description
get_sample_details
Usage
1
get_sample_details(full_xmlTree)
Arguments
full_xmlTree
xml tree downloaded from NCBI website and parsed to R
structure with xmlInternalTreeParse by earlier stages of the
build_genbank_df function.
Details
This function gets basic background details of the sample from the xml tree
input
Function designed to sit within build_genbank_df. In general, the
full_xmlTree should be provided by earlier stages of the
build_genbank_df function. Extracts details about the accession,
such as species name.
EvolEcolGroup/mtDNAcombine documentation built on July 8, 2021, 10:30 p.m.
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Description Usage Arguments Details
View source: R/get_sample_details.R
Description
get_sample_details
Usage
1 | get_sample_details(full_xmlTree)
|
Arguments
full_xmlTree |
xml tree downloaded from NCBI website and parsed to R
structure with |
Details
This function gets basic background details of the sample from the xml tree input
Function designed to sit within build_genbank_df. In general, the
full_xmlTree should be provided by earlier stages of the
build_genbank_df function. Extracts details about the accession,
such as species name.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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