DsATACsc.archr: DsATACsc.archr

In GreenleafLab/ChrAccR: Analyzing chromatin accessibility data in R

DsATACsc.archr

Description

Create a DsATACsc dataset from an ArchR project

Usage

DsATACsc.archr(
  ap,
  useTiling = TRUE,
  keepInsertionInfo = FALSE,
  diskDump.fragments = keepInsertionInfo
)

Arguments

ap	ArchR project object
useTiling	flag indicating whether to use tiling information from the ArchR project
keepInsertionInfo	flag indicating whether to maintain the insertion information in the resulting object.
diskDump.fragments	Keep fragment coordinates stored on disk rather than in main memory. This saves memory, but increases runtime and I/O.

Value

DsATACsc object

Author(s)

Fabian Mueller

GreenleafLab/ChrAccR documentation built on March 22, 2023, 11:42 p.m.