fastqDirToTable: fastqDirToTable
In GreenleafLab/ChrAccR: Analyzing chromatin accessibility data in R
View source: R/utils_filehandling.R
fastqDirToTable R Documentation
fastqDirToTable
Description
scan a directory containing fastq files and create a sample annotation table from the file names
Usage
fastqDirToTable(fqDir, tabFn = NULL, pat = "")
Arguments
fqDir
string specifying a directory with fastq files
tabFn
filename specifying the where the table should be written to. If NULL (default), the table will just be returned
as data frame
pat
(optional) regular expression that fastq file names have to pass
Value
data frame of parsed annotation
Author(s)
Fabian Mueller
GreenleafLab/ChrAccR documentation built on March 22, 2023, 11:42 p.m.
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View source: R/utils_filehandling.R
| fastqDirToTable | R Documentation |
fastqDirToTable
Description
scan a directory containing fastq files and create a sample annotation table from the file names
Usage
fastqDirToTable(fqDir, tabFn = NULL, pat = "")
Arguments
fqDir |
string specifying a directory with fastq files |
tabFn |
filename specifying the where the table should be written to. If NULL (default), the table will just be returned as data frame |
pat |
(optional) regular expression that fastq file names have to pass |
Value
data frame of parsed annotation
Author(s)
Fabian Mueller
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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