merge_loom: Merge two loom files into one and produce rvel.cd
In GrigoriiNos/rimmi.rnaseq: Set of functions for genomics data analysis
merge_loom R Documentation
Merge two loom files into one and produce rvel.cd
Description
This function allows you to merge emat and nmat matrices into one and then calculate rvel.cd for velocyto analysis
Usage
merge_loom(loom1, loom2, Seurat_obj, sample1, sample2, emb)
Arguments
loom1
path to loom file 1
loom2
path to loom file 2
sample1
sample name 1, for the prefix in cellular barcodes
sample2
sample name 2, for the prefix in cellular barcodes
emb
2d embedding
Value
umap 2d plot with velocity
GrigoriiNos/rimmi.rnaseq documentation built on April 29, 2022, 5:18 p.m.
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| merge_loom | R Documentation |
Merge two loom files into one and produce rvel.cd
Description
This function allows you to merge emat and nmat matrices into one and then calculate rvel.cd for velocyto analysis
Usage
merge_loom(loom1, loom2, Seurat_obj, sample1, sample2, emb)
Arguments
loom1 |
path to loom file 1 |
loom2 |
path to loom file 2 |
sample1 |
sample name 1, for the prefix in cellular barcodes |
sample2 |
sample name 2, for the prefix in cellular barcodes |
emb |
2d embedding |
Value
umap 2d plot with velocity
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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