volcano_pl: plot volcano plot 2

In GrigoriiNos/rimmi.rnaseq: Set of functions for genomics data analysis

plot volcano plot 2

Description

better version volcano plot

Usage

volcano_pl(
  response,
  ES_th = 0.5,
  ES_th_plot = 0.5,
  log10pval = -log10(0.05),
  y1 = 0,
  y2 = 20,
  x1 = -1,
  x2 = 1,
  title,
  genes_plot = NA
)

Arguments

response	table with DEG
log10pval	log10pval threshold to plot
y1	y1 limut
y2	y2 limit
x1	x1 limit
x2	x2 limit
title	the name of your plot
genes_plot	force these genes into the plot
avg_logFC_th	avg_logFC threshold

Value

volcano plot

Examples

volcano_pl(responce)

GrigoriiNos/rimmi.rnaseq documentation built on April 29, 2022, 5:18 p.m.