In HIVDiversity/MotifBinner2: Processes NGS Primer ID Datasets

alignBinsSP

aligns a single pair of pair-end reads to the profile

opts_chunk$set(echo=FALSE)
opts_chunk$set(warning=FALSE)
opts_chunk$set(fig.pos = 'H')

library(MotifBinner2)

if (!exists('result'))
{
  result <- all_results[[grep('alignBinsSP', names(all_results))[1]]]
}
if (class(result) != 'alignBinsSP')
{
  result <- all_results[[grep('alignBinsSP', names(all_results))[1]]]
}

kable_summary(result$summary)

timingTable(result)

HIVDiversity/MotifBinner2 documentation built on May 6, 2019, 6:44 p.m.