View source: R/consensus_cutoff.R
The function calls the sim_all_parents_main_off function and saves the result to a folder together with a file that contains a description of the simulation parameters.
1 2 3  | sim_wrapper(output_dir, file_name, size_start = 100, size_stop = 10000,
  size_step = 100, pl = 9, phi = (1/50), repeats = 1000,
  verbose = FALSE, ncpu = 8)
 | 
output_dir | 
 The output directory where the simulation result must be placed  | 
file_name | 
 The name of the output file in which the results will be stored. Must end in .csv.  | 
size_start | 
 The smallest bin size to simulate  | 
size_stop | 
 The largest bin size to simulate  | 
size_step | 
 The size of the steps to take to reach the largest bin size  | 
pl | 
 PID length (9)  | 
phi | 
 Sequencing read error rate (1/50)  | 
repeats | 
 The number of repeats to run for each bin size  | 
ncpu | 
 Number of cores to use for simulation  | 
vebose | 
 If TRUE print loop progress  | 
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