MAPK.plot.heatmap.raster: Plots a heatmap using grid.raster

In Huber-group-EMBL/RNAinteractMAPK: Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Description

This functions provides a grid plot that displays the raster image of a heatmap without any axis or label. This function is adapted from the function grid.sgiHeatmap from the package RNAinteract-package. It is highly recommended to use the original function grid.sgiHeatmap.

Usage

MAPK.plot.heatmap.raster(X, subset = NULL,
                         hc.row = NULL, hc.col = NULL,
                         pi.max = NULL)

Arguments

X	A matrix of pairwise interaction scores.
subset	A subset of genes that are displayed in the rows.
hc.row	A hclust object.
hc.col	A hclust object.
pi.max	The maximum interaction score of the colorbar. All interaction scores larger than this value will be displayed in the same color.

Value

Nothing is returned.

Author(s)

Bernd Fischer

See Also

RNAinteract-package, RNAinteractMAPK-package

Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.