MAPK.report.gene.lists.paper: A hitlist report.

In Huber-group-EMBL/RNAinteractMAPK: Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Description

Reports the hitlist of genetic interactions, with p-values from a t-test with pooled variance estimate, from limma, and from Hotelling T^2 test.

Usage

MAPK.report.gene.lists.paper(sgi, sgilimma, sgi3T2, screen = "mean")

Arguments

sgi	An object of class RNAinteract containing p-values from a t-test with pooled variance estimate.
sgilimma	An object of class RNAinteract containing p-values from limma.
sgi3T2	An object of class RNAinteract containing p-values from a Hotelling T^2 test.
screen	The screen name for which the report should be written.

Details

Writes tab-separated lists for each single test as well as a joint table with all three tests.

Value

Nothing is returned.

Author(s)

Bernd Fischer

See Also

RNAinteract-package, RNAinteractMAPK-package

Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.