cellTiterGlo: Comparison of interaction experiment with an cellTiterGlo...

Description Usage Format Source Examples

Description

For ten gene pairs genetic interactions are measured. The experiment contains 24 different conditions. These are repeated in each row of the three 384 mutli well plates. The data.frame contains the plate annotation as well as the viability readout for the three plates.

Usage

1

Format

A data frame with 384 observations on the following 6 variables.

Well

a character vector

dsRNA_1

a character vector

dsRNA_2

a character vector

plate1

a numeric vector

plate2

a numeric vector

plate3

a numeric vector

Source

Horn, Sandmann, Fischer, Huber, Boutros, Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi, Nature Methods, 2011, Figure S15.

Examples

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Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.