mRNAdoubleKDefficiency: mRNA levels for double knock downs
In Huber-group-EMBL/RNAinteractMAPK: Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi
Description
Usage
Format
Source
Examples
Description
qPCR measurements for the mRNA level after a double gene knock down (ratio relative to wild type control). The experiments tests the knock down efficiency in the presence of a second gene knock down.
Usage
1
Format
A data frame with 320 observations on the following 5 variables.
templatean ordered factor with levels Fluc < CG10417 < CG13197 < CG9391 < egr < lic < PRL-1 < Rho1 < Tak1
querya factor with levels CG10417 [query dsRNA] CG13197 [query dsRNA] CG9391 [query dsRNA] egr [query dsRNA] lic [query dsRNA] PRL-1 [query dsRNA] Rho1 [query dsRNA] Tak1 [query dsRNA]
qPCR.targeta factor with levels CG10417 CG13197 CG9391 egr lic PRL-1 Rho1 Tak1
passagea factor with levels passage 4 passage 42
RNAia numeric vector
Source
Horn, Sandmann, Fischer, Huber, Boutros, Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi, Nature Methods, 2011, Figure S2.
Examples
1
2
Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.
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Description Usage Format Source Examples
Description
qPCR measurements for the mRNA level after a double gene knock down (ratio relative to wild type control). The experiments tests the knock down efficiency in the presence of a second gene knock down.
Usage
1 |
Format
A data frame with 320 observations on the following 5 variables.
templatean ordered factor with levels
Fluc<CG10417<CG13197<CG9391<egr<lic<PRL-1<Rho1<Tak1querya factor with levels
CG10417 [query dsRNA]CG13197 [query dsRNA]CG9391 [query dsRNA]egr [query dsRNA]lic [query dsRNA]PRL-1 [query dsRNA]Rho1 [query dsRNA]Tak1 [query dsRNA]qPCR.targeta factor with levels
CG10417CG13197CG9391egrlicPRL-1Rho1Tak1passagea factor with levels
passage 4passage 42RNAia numeric vector
Source
Horn, Sandmann, Fischer, Huber, Boutros, Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi, Nature Methods, 2011, Figure S2.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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