singleKDphenotype: Single knockdown phenotype

In Huber-group-EMBL/RNAinteractMAPK: Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Description

This data.frame singleKDphenotype contains a screen assessing the single knock down phenotypes (nrCells, intensity, and area) of the tested genes. singleKDphenotypeAnno is a data.frame describing the plate annotation.

Usage

data(singleKDphenotype)

Format

The format is: chr "singleKDphenotype" chr "singleKDphenotypeAnno"

Source

Horn, Sandmann, Fischer, Huber, Boutros, Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi, Nature Methods, 2011, Figure S3.

Examples

data(singleKDphenotype)
head(singleKDphenotype)
head(singleKDphenotypeAnno)

Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.