MAPK.smooth.scatter: smooth scatter using grid raster

In Huber-group-EMBL/RNAinteractMAPK: Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Description

This function is a reimplementation of smoothScatter. For nicer graphics output the background image is written by grid.raster. It is recommended to use the smoothScatter function from the graphics package.

Usage

MAPK.smooth.scatter(x, y, n = 75,
    nrpoints = 100, col = "blue", 
    pch = 20, size = unit(0.3, "char"), cex = 1.2,
    colramp = colorRampPalette(c("white", "blue", "green", "yellow", "red"))(256),
    xlab = "", ylab = "", respect = FALSE)

Arguments

x	x-values.
y	y-values. Has to be the same length as x.
n	nr of bins used for the kernel density estimation.
nrpoints	nrpoints points in the lowest density region will be plotted. This allows the identification of outliers.
col	color of points.
pch	symbol to plot points.
size	The size of the points.
cex	The size of the label text.
colramp	color ramp for the density plot.
xlab,ylab	axis labels.
respect	A logical value indicating if the height and width of the axis scales should respect each other.

Details

Plots a density plot with grid graphics.

Author(s)

Bernd Fischer

See Also

RNAinteractMAPK-package, smoothScatter

Huber-group-EMBL/RNAinteractMAPK documentation built on Dec. 31, 2020, 1:01 p.m.