updateObject-EMSet-method: updateObject
In IMB-Computational-Genomics-Lab/ascend: ascend - Analysis of Single Cell Expression, Normalisation, and Differential expression
Description
Usage
Arguments
Value
Examples
Description
Converts EMSets from ascend version < 0.5.0 to new EMSet that inherits from
SingleCellExperiment. Please note that normalised data will be used as the
main count matrix, and loaded into the normcounts slot if a normalisation
method was logged. Quality control metrics will be re-calculated upon
conversion.
Usage
1
2
## S4 method for signature 'EMSet'
updateObject(object)
Arguments
object
An old EMSet.
Value
An updated EMSet.
Examples
1
2
3
4
5
## Not run:
# Make sure you replace your original object with the updated object
object <- updateObject(object)
## End(Not run)
IMB-Computational-Genomics-Lab/ascend documentation built on Aug. 29, 2019, 4:10 a.m.
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Description Usage Arguments Value Examples
Description
Converts EMSets from ascend version < 0.5.0 to new EMSet that inherits from SingleCellExperiment. Please note that normalised data will be used as the main count matrix, and loaded into the normcounts slot if a normalisation method was logged. Quality control metrics will be re-calculated upon conversion.
Usage
1 2 | ## S4 method for signature 'EMSet'
updateObject(object)
|
Arguments
object |
An old EMSet. |
Value
An updated EMSet.
Examples
1 2 3 4 5 | ## Not run:
# Make sure you replace your original object with the updated object
object <- updateObject(object)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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