IPS_calculation: This R-script can be used to calculate Immunophenoscore (IPS)
In IOBR/IOBR: Immune Oncology Biological Research
View source: R/IPS_calculation.R
IPS_calculation R Documentation
This R-script can be used to calculate Immunophenoscore (IPS)
Description
This R-script can be used to calculate Immunophenoscore (IPS)
Usage
IPS_calculation(project = NULL, eset, plot = FALSE)
Arguments
project
default is NULL
eset
expression data from tab-delimited text file, with official human gene symbols (HGNC) in the rowname;
expression values (i.e. log2(TPM+1) for each sample in columns
plot
default = FALSE;Needs packages ggplot2, grid, gridExtra
Value
IPS score data frame
Examples
if TRUE, plot will be saved
file to deposit reslut
首先构建图的储存文件夹
IOBR/IOBR documentation built on May 5, 2024, 2:34 p.m.
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View source: R/IPS_calculation.R
| IPS_calculation | R Documentation |
This R-script can be used to calculate Immunophenoscore (IPS)
Description
This R-script can be used to calculate Immunophenoscore (IPS)
Usage
IPS_calculation(project = NULL, eset, plot = FALSE)
Arguments
project |
default is NULL |
eset |
expression data from tab-delimited text file, with official human gene symbols (HGNC) in the rowname; expression values (i.e. log2(TPM+1) for each sample in columns |
plot |
default = FALSE;Needs packages ggplot2, grid, gridExtra |
Value
IPS score data frame
Examples
if TRUE, plot will be saved
file to deposit reslut
首先构建图的储存文件夹
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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