View source: R/format_signatures.R
format_signatures | R Documentation |
Transform signature gene data into list format
format_signatures(sig_data, save_signature = FALSE, output_name = "signatures")
sig_data |
signature data with signature name as column name and genes in row, using 'NA' to substitude the missing value |
save_signature |
logical, save siganture list as RData |
output_name |
string of name to save signature RData |
list of signatures
Dongqiang Zeng
# load signature data frame
data("sig_excel", package = "IOBR")
# transform into gene list for IOBR functions
format_signatures(sig_excel)
reading each column and transfer it to a list
standerdized the name of list
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