limma.dif: Title
In IOBR/IOBR: Immune Oncology Biological Research
View source: R/feature_selection.R
limma.dif R Documentation
Title
Description
Title
Usage
limma.dif(exprdata, pdata, contrastfml)
Arguments
exprdata
input matrix.Rownames should be features like gene symbols or cgi, colnames be samples
pdata
phenotype data.Two-column dataframe which column 1 should be the same with the colnames of exprdata and column 2 are the grouping variable.
contrastfml
see ?makeContrasts
Value
a data frame return by limma::toptable, which genes at rows and following columns: genelist, logFC, AveExpr...
IOBR/IOBR documentation built on May 5, 2024, 2:34 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/feature_selection.R
| limma.dif | R Documentation |
Title
Description
Title
Usage
limma.dif(exprdata, pdata, contrastfml)
Arguments
exprdata |
input matrix.Rownames should be features like gene symbols or cgi, colnames be samples |
pdata |
phenotype data.Two-column dataframe which column 1 should be the same with the colnames of exprdata and column 2 are the grouping variable. |
contrastfml |
see ?makeContrasts |
Value
a data frame return by limma::toptable, which genes at rows and following columns: genelist, logFC, AveExpr...
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.