create_ideo: Title Create customized ideogram ggplot object

In Irenexzwen/gginteract: Pairend reads interaction visualization with customized ggplot object

Title Create customized ideogram ggplot object

Description

Title Create customized ideogram ggplot object

Usage

create_ideo(genome = "hg38", chr, ideo.width, ideo.height, ydrift = 0,
  xdrift = 0, whratio = 16)

Arguments

genome	String. Genome version eg."hg38","mm10","mm20". default("hg38")
chr	String. chromosome name eg."chr4".
ideo.width	Numeric. Width of the ideogram ggplot object.
ideo.height	Numeric. Height of the ideogram, if missing, then height would be calculated by ideo.width/whratio.
ydrift	Numeric. x axis dirft from 0.
xdrift	Numeric. y axis dirft from 0.
whratio	Numeric, the width/height ratio of the ideogram.

Value

ideo class

Examples

ideo <- create_ideo(chr="chr4",ideo.width=400)

Irenexzwen/gginteract documentation built on Feb. 27, 2023, 3:51 p.m.