gene_anno-class: Title Gene trascript annotation class

In Irenexzwen/gginteract: Pairend reads interaction visualization with customized ggplot object

Title Gene trascript annotation class

Description

Title Gene trascript annotation class

Value

gene_anno class.

Slots

name

character. gene name.

chr_num

character. the number of chromosme. eg("1", "5", "X").

chr

character. chromosme name.

chromstart

numeric. numeric. chromosome start based on annotaion.

chromend

numeric. numeric. chromosome end based on annotaion.

genelen

numeric. length of transcript.

center

numeric. center coordinate of the transcript.

anno

data.frame. A datafram contain all exon coordinates.

Examples

NULL

Irenexzwen/gginteract documentation built on Feb. 27, 2023, 3:51 p.m.