pairend-class: Title Pairend fashion interaction plot

In Irenexzwen/gginteract: Pairend reads interaction visualization with customized ggplot object

Title Pairend fashion interaction plot

Description

Title Pairend fashion interaction plot

Value

pairend object

Slots

geom_pair

list. geom layer list.

geneleft

gene_anno. gene_anno. gene annotation object for the left gene.

generight

gene_anno. gene_anno. gene annotation object for the right gene.

.TopLeft_x

numeric. top left coordinates of the ggplot object. Here top left also indicates the left coord of the gene left

.TopRight_x

numeric. top right coordinates of the ggplot object. Here top right also indicates the right coord of the gene right.

.BotLeft_x

numeric. bottom left coordinates of the ggplot object. Here botleft also indicates the leftmost coord of the reads mapping to leftgene.

.BotRight_x

numeric. bottom right coordinates of the ggplot object. Here botright also indicates the rightmost coord of the reads mapping to rightgene.

.Top_y

numeric. top coordinates of the ggplot object.

.Bot_y

numeric. bottom coordinates of the ggplot object.

.gr1_right

numeric. rightmost coordinate of geneleft.

.gr2_left

numeric. leftmost coordinate of generight.

.VEXON

numeric. vertical height of exon.

Examples

Null

Irenexzwen/gginteract documentation built on Feb. 27, 2023, 3:51 p.m.