embed: Wrapper around UMAP and/or TSNE
In Jerby-Lab/opipes: What the Package Does (One Line, Title Case)
embed R Documentation
Wrapper around UMAP and/or TSNE
Description
functionality for returning UMAP an TSNE results
Usage
embed(so, tsne.flag = F, umap.flag = F, n_pcs = 30)
Arguments
so
a SeuratObject of your data
tsne.flag
boolean, run tSNE?
umap.flag
boolean, run umap?
n_pcs
number of PCs to run umap and tsne on
Value
a list of all parameters calculated
Jerby-Lab/opipes documentation built on Oct. 7, 2022, 12:28 p.m.
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| embed | R Documentation |
Wrapper around UMAP and/or TSNE
Description
functionality for returning UMAP an TSNE results
Usage
embed(so, tsne.flag = F, umap.flag = F, n_pcs = 30)
Arguments
so |
a SeuratObject of your data |
tsne.flag |
boolean, run tSNE? |
umap.flag |
boolean, run umap? |
n_pcs |
number of PCs to run umap and tsne on |
Value
a list of all parameters calculated
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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