spearman.cor: Compute Spearman Correlation on two list objects
In Jerby-Lab/opipes: What the Package Does (One Line, Title Case)

spearman.cor

R Documentation

Compute Spearman Correlation on two list objects

Description

Wrapper around correlation.

Usage

spearman.cor(
  v1,
  v2 = NULL,
  method = "spearman",
  use = "pairwise.complete.obs",
  match.flag = F,
  alternative = "two.sided",
  upper.tri.flag = F
)

Arguments

`v1`	matrix, rows are samples, columns are genes
`v2`	metric to evaluate the correlation with (must be same length as rows of v1)
`method`	(default = "spearman")
`use`	(default = "pairwise.complete.obs") type of correlation
`match.flag`	(default = F)
`alternative`	(default = "two.sided") alternative hypothesis for correlation test
`upper.tri.flag`	(default = F)