scRNA_cluster.annotation.ttest: Compute _t_-tests

In Jerby-Lab/opipes: What the Package Does (One Line, Title Case)

Compute t-tests

Description

function for computing two sample t-test on single cell clustered data

Usage

scRNA_cluster.annotation.ttest(r, cell.clusters, minZ = 10, subsample = F)

Arguments

r	data list including the gene expression data
cell.clusters	a n-length list of cluster assignments, where n = number of cells
minZ	cutoff for significance in the -log10(p) space (default = 10)

Value

data list, but now including cell.types, and assignments.ttests slots

Jerby-Lab/opipes documentation built on Oct. 7, 2022, 12:28 p.m.