covarianceOU: Covariance from phylogeny under the OU model
In Jmendo12/evemodel: Expression Variance Evolution Model
Description
Usage
Arguments
Value
Description
Calculates the OU model covariance matrix given alpha parameters for each edge
and the evolutionary variance at each node of a tree.
Usage
1
covarianceOU(tree, alphas, evol.variance)
Arguments
tree
Species phylogeny (phylo object)
alphas
Vector of alpha parameters for each edge in the tree
evol.variance
Vector of evolutionary variance for each edge in the tree (as generated by evolVarOU)
Value
Covariance matrix
Jmendo12/evemodel documentation built on June 17, 2020, 8:56 p.m.
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Description Usage Arguments Value
Description
Calculates the OU model covariance matrix given alpha parameters for each edge and the evolutionary variance at each node of a tree.
Usage
1 | covarianceOU(tree, alphas, evol.variance)
|
Arguments
tree |
Species phylogeny (phylo object) |
alphas |
Vector of alpha parameters for each edge in the tree |
evol.variance |
Vector of evolutionary variance for each edge in the tree (as generated by |
Value
Covariance matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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