evolVarOU: Calculate evolutionary variance from phylogeny under the OU...
In Jmendo12/evemodel: Expression Variance Evolution Model
Description
Usage
Arguments
Value
Description
Calculate expected species mean, and evolutionary variance for each node in the tree
given theta, sigma^2 and alpha parameters for each edge in the tree.
Usage
1
evolVarOU(tree, alphas, sigma2s, rootVar)
Arguments
tree
Species phylogeny (phylo object)
alphas
Vector of alpha parameters for each edge in the tree
sigma2s
Vector of sigma2 parameters for each edge in the tree
rootVar
The evolutionary variance at the root node
Value
Vector of variances for each node
Jmendo12/evemodel documentation built on June 17, 2020, 8:56 p.m.
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Description Usage Arguments Value
Description
Calculate expected species mean, and evolutionary variance for each node in the tree given theta, sigma^2 and alpha parameters for each edge in the tree.
Usage
1 | evolVarOU(tree, alphas, sigma2s, rootVar)
|
Arguments
tree |
Species phylogeny (phylo object) |
alphas |
Vector of alpha parameters for each edge in the tree |
sigma2s |
Vector of sigma2 parameters for each edge in the tree |
rootVar |
The evolutionary variance at the root node |
Value
Vector of variances for each node
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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