Description Usage Arguments Value
View source: R/oneThetaModel.R
Simulate expression data for the one-theta EVE model, i.e. same parameters on all edges
1 | simOneTheta(n, tree, colSpecies, theta, sigma2, alpha, beta)
|
n |
Number of "genes" to simulate |
tree |
Phylogeny |
colSpecies |
A character vector with same length as columns in returned expression matrix, specifying the species, i.e. tip labels in the phylogeny, for the corresponding column. |
theta |
Value of the theta parameter |
sigma2 |
Value of the sigma2 parameter |
alpha |
Value of the alpha parameter |
beta |
Value of the beta parameter |
Matrix of simulated gene expression values with samples in columns and genes in rows
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