kouno.expr: Kouno et al. investigated the transcriptional network...

In JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Description

Kouno et al. investigated the transcriptional network controlling how THP-1 human myeloid monocytic leukemia cells differentiate into macrophages. They provide expression values for 45 genes in 960 single cells captured across 8 distinct time points.

Usage

data(KounoDeLorean)

Format

There are three objects in this data:

• kouno.expr A matrix of log expression values with no missing data. Rows are named by genes and columns are named by cells/samples.

• kouno.gene.meta A data frame containing meta-data about the genes.

• kouno.cell.meta A data frame containing meta-data about the cells

Source

http://genomebiology.com/2013/14/10/R118/abstract

JohnReid/DeLorean documentation built on Sept. 27, 2021, 5:45 a.m.