roughness.test: Calculate roughnesses under fit samples and also under random...
In JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data
Description
Calculate roughnesses under fit samples and also under random
permutations
Usage
1
roughness.test(dl, expr.held.out = dl$expr.held.out, num.perms = 1000)
Arguments
dl
de.lorean object
expr.held.out
The expression matrix including the held out genes
num.perms
Number of permutations to test
JohnReid/DeLorean documentation built on Sept. 27, 2021, 5:45 a.m.
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Description
Calculate roughnesses under fit samples and also under random permutations
Usage
1 | roughness.test(dl, expr.held.out = dl$expr.held.out, num.perms = 1000)
|
Arguments
dl |
de.lorean object |
expr.held.out |
The expression matrix including the held out genes |
num.perms |
Number of permutations to test |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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