DNBcompute_custom.DNB_output: Compute the Dynamic Network Biomarkers(DNB) model with...

In Kaiyu-W/DNBr: Compute the Dynamic Network Biomarkers (DNB) model

Compute the Dynamic Network Biomarkers(DNB) model with customized Modules

Description

Compute the Dynamic Network Biomarkers(DNB) model with customized Modules

Usage

## S3 method for class 'DNB_output'
DNBcompute_custom(
  data,
  module_list,
  meta = NULL,
  meta_levels = NULL,
  force_allgene = TRUE,
  size_effect = TRUE,
  quiet = FALSE,
  ...
)

Arguments

data	existing S3:DNB_output object
module_list	a list of module genes
meta	not use
meta_levels	not use
force_allgene	whether force to use all genes from data, default TRUE
size_effect	whether consider the effect of sample size when compute CI of DNB, default TRUE
quiet	do not message
...	not use

Value

S3:DNB_output

Kaiyu-W/DNBr documentation built on April 27, 2024, 10:09 a.m.