compute_score_eachgroup: process function after modules have been defined

In Kaiyu-W/DNBr: Compute the Dynamic Network Biomarkers (DNB) model

process function after modules have been defined

Description

the parameters come from inner DNBcompute

Usage

compute_score_eachgroup(
  cut_sle,
  group,
  diffgenes,
  hig_gene,
  sle_tab,
  cv_all,
  sd_all,
  mean_all,
  minModule,
  maxModule,
  size_effect
)

Arguments

cut_sle	module information table (cluster, which module each gene belongs to)
group	group (assay_name)
diffgenes	same to DNBcompute
hig_gene	same to DNBcompute
sle_tab	selected table
cv_all	all cv values
sd_all	all sd values
mean_all	all mean values
minModule	same to DNBcompute
maxModule	same to DNBcompute
size_effect	same to DNBcompute

Kaiyu-W/DNBr documentation built on April 27, 2024, 10:09 a.m.