ScoreExtract: ScoreExtract

In Kaiyu-W/DNBr: Compute the Dynamic Network Biomarkers (DNB) model

ScoreExtract

Description

Extract the score information from object (S3:DNB_output)

Usage

ScoreExtract(
  object,
  ranking = NULL,
  group = NULL,
  resource = NULL,
  quiet = FALSE,
  ...
)

Arguments

object	S3:DNB_output
ranking	the ranking of exactly module, default 1 if NULL
group	which group to select module, default random selected if NULL
resource	the actual module name, ranking & group will be ignored if use
quiet	do not message
...	for future use

Value

data.frame

Author(s)

Kaiyu Wang, in ChenLab of CAS, Shanghai, China

Examples

data(data.example)
data(meta.example)
a <- DNBcompute(data.example, meta.example)
b <- DNBfilter(a, ntop = 5)
df_score <- ScoreExtract(
    object = b,
    ranking = NULL,
    group = NULL
)
df_score

Kaiyu-W/DNBr documentation built on April 27, 2024, 10:09 a.m.