calcSubcloneProportions: Calculate proportions of subclones in each sample (assumes...
In KarchinLab/pictograph: Tools for modeling clonal evolution of a cancer
View source: R/subclone-proportion.R
calcSubcloneProportions R Documentation
Calculate proportions of subclones in each sample (assumes CCFs comply with lineage precedence and sum condition)
Description
Calculate proportions of subclones in each sample (assumes CCFs comply with lineage precedence and sum condition)
Usage
calcSubcloneProportions(w_mat, tree_edges)
Arguments
w_mat
Matrix of CCF estimates (from estimateCCFs)
tree_edges
Tibble of tree edges with columns edge, parent, and child
KarchinLab/pictograph documentation built on Oct. 25, 2024, 10:10 a.m.
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View source: R/subclone-proportion.R
| calcSubcloneProportions | R Documentation |
Calculate proportions of subclones in each sample (assumes CCFs comply with lineage precedence and sum condition)
Description
Calculate proportions of subclones in each sample (assumes CCFs comply with lineage precedence and sum condition)
Usage
calcSubcloneProportions(w_mat, tree_edges)
Arguments
w_mat |
Matrix of CCF estimates (from |
tree_edges |
Tibble of tree edges with columns edge, parent, and child |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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