plotSubcloneBar: Plot subclone proportions in each sample as stacked bar chart

In KarchinLab/pictograph: Tools for modeling clonal evolution of a cancer

Plot subclone proportions in each sample as stacked bar chart

Description

Plot subclone proportions in each sample as stacked bar chart

Usage

plotSubcloneBar(
  subclone_props,
  palette = viridis::viridis,
  sample_names = NULL,
  label_cluster = FALSE
)

Arguments

subclone_props	matrix of subclone proportions (returned from calcSubcloneProportions)
sample_names	(Optional) Vector of sample names. Should be in the order of columns of subclone_props
label_cluster	(Default FALSE) Whether to add cluster label to text on stacked bar

KarchinLab/pictograph documentation built on Oct. 25, 2024, 10:10 a.m.