calcTreeScores: Calculate SCHISM fitness scores for trees
In KarchinLab/pictograph: Tools for modeling clonal evolution of a cancer
calcTreeScores R Documentation
Calculate SCHISM fitness scores for trees
Description
Calculate SCHISM fitness scores for trees
Usage
calcTreeScores(mcf_chain, trees, purity, mc.cores = 1)
Arguments
trees
list of tibbles, where each tibble contains edges of a tree with columns edge, parent, child
w_chain
MCMC chain of CCF values, which is the first item in the list returned by clusterSep
KarchinLab/pictograph documentation built on Oct. 25, 2024, 10:10 a.m.
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| calcTreeScores | R Documentation |
Calculate SCHISM fitness scores for trees
Description
Calculate SCHISM fitness scores for trees
Usage
calcTreeScores(mcf_chain, trees, purity, mc.cores = 1)
Arguments
trees |
list of tibbles, where each tibble contains edges of a tree with columns edge, parent, child |
w_chain |
MCMC chain of CCF values, which is the first item in the list returned by |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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