filterEdgesBasedOnCCFs: Filter possible edges based on lineage precedence
In KarchinLab/pictograph: Tools for modeling clonal evolution of a cancer
View source: R/tree-gabowmyers.R
filterEdgesBasedOnCCFs R Documentation
Filter possible edges based on lineage precedence
Description
Filter possible edges based on lineage precedence
Usage
filterEdgesBasedOnCCFs(graph_G, mcf, thresh = 0.1)
Arguments
graph_G
tibble of possible edges with columns edge, parent, child
thresh
maximum allowed violation of lineage precedence (default = 0.1)
w
matrix of CCF values (rows = clusters, columns = samples)
KarchinLab/pictograph documentation built on Oct. 25, 2024, 10:10 a.m.
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View source: R/tree-gabowmyers.R
| filterEdgesBasedOnCCFs | R Documentation |
Filter possible edges based on lineage precedence
Description
Filter possible edges based on lineage precedence
Usage
filterEdgesBasedOnCCFs(graph_G, mcf, thresh = 0.1)
Arguments
graph_G |
tibble of possible edges with columns edge, parent, child |
thresh |
maximum allowed violation of lineage precedence (default = 0.1) |
w |
matrix of CCF values (rows = clusters, columns = samples) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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